LibGuides: Chemistry: Molecular Visualization

Proteopedia

ChemTube3D
ChemTube3D contains interactive 3D chemistry animations and structures, with supporting information, for students studying some of the most important topics in advanced school chemistry and university chemistry courses. Use the menus to explore them.

ChemSketch ChemSketch is a drawing package that allows you to draw chemical structures including organics, organometallics, polymers, and Markush structures. It also includes features such as calculation of molecular properties (e.g., molecular weight, density, molar refractivity etc.), 2D and 3D structure cleaning and viewing, functionality for naming structures (fewer than 50 atoms and 3 rings), and prediction of logP.
MarvinSketch MarvinSketch allows users to quickly draw molecules through basic functions on the GUI and advanced functionalities such as sprout drawing, customisable shortcuts, abbreviated groups, default and user-defined templates and context-sensitive popup menus.
Avogadro Avogadro is an advanced molecule editor and visualizer designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible high quality rendering and a powerful plugin architecture.
ChemSpider ChemSpider is a free chemical structure database providing fast text and structure search access to over 55 million structures from hundreds of data sources.
NMR DB NMR DB provides tools that predict spectra to assist with teaching and learning NMR spectra.
VMD VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.